I'm with Craig - I've never had this happen either, and I don't see anything obviously out of place in your editor. I guess I'd just go through and make sure you have the most recent firmware on everything, and double check to make sure the MIDI settings on all the Strymon pedals is as it is supposed to be. There's a lot of settings that have to be just right for this to work, and (speaking from experience), it's really easy to miss one.
I don't think it's the cause, but I did notice that your MIDI clock is set to Auto. I'd recommend setting it to Master. I've had issues with my delay tempo going crazy before I made that change, and I'm pretty sure I remember that happening to others here as well.
I've attached my current settings file if you want to take a look. I use a Timeline and Bigsky and everything works perfectly in the Editor and Nixie for me. Maybe you'll find something different there that I missed?